Friday, March 12, 2010

Optional model components log

I was going through some estimate output recently and noted that:

The progress/log file produced during 'estimate' (the one without an extension) does not automatically log the optional model components which are switched on or off.

e.g. information contained within this file

Optional model components
(0 = off, 1 = on):
GROWTH_RESP = 0
LITTER_POOL = 1
LLOYD_TAYLOR = 0
SEASONAL_R_SOIL = 0
WATER_PSN = 1
WATER_HRESP = 1
DAYCENT_WATER_HRESP = 0
MODEL_WATER = 1
COMPLEX_WATER = 1
LITTER_WATER = 0
LITTER_WATER_DRAINAGE = 0
SNOW = 1
GDD = 0
SOIL_PHENOL = 0

some newer components are not listed here ... notably ROOTS.

I've never looked in to how this log file is generated as I have not spent lots of time switching on or off model components (except ROOTS) and in that case I new whether or not roots was switched on.

If you are planning on investigating the effect of including a process or two (e.g. MODIS or ROOTS) then for the moment you need to manually keep track of which of these components are switched on or off.